Incorporating wastewater-based epidemiology into a real-time, multiplex public health surveillance system

Epidemiological surveillance is of crucial importance to monitor a population's health and to efficiently prioritise healthcare resources. Surveillance methods need to deliver unbiased estimates of local health metrics (in space and time) and to detect meaningful departures from expectation that can trigger consideration of a focal public health response. The COVID-19 pandemic has highlighted the importance of combining community surveillance with traditional diagnostic health data, at the same time flagging the need for a validated method to integrate these sources.
This project will build a public health surveillance framework that employs advanced statistical methods to synthesise multiple data sources. It will make use of the ever-increasing healthcare data available in the UK, collected through administrative registries (e.g. hospital admissions and deaths), randomised surveys, as well as through syndromic sources such as GP prescriptions and visits, 111 calls, symptoms apps. Additionally, wastewater monitoring was extensively used as an economically efficient method to monitor COVID-19 circulating in communities and has the potential of being a key component in an integrated surveillance system. However, the concentration of contaminants in wastewater
can be affected by population characteristics that vary in space and time, as well as by changes related to the shedding of the viruses. Consequently, while some studies have established an association between aggregated wastewater and clinical measurements (e.g., lateral flow tests), this relationship has been shown to vary over space and time, to be non-linear and likely disease-specific.
We will build a modular framework where each data source will be modelled within a module to account for uncertainties and potential biases. This collection of data modules will then be linked probabilistically so that all available data will contribute to the estimation of the underlying disease process. This in turn will...