Finland – Research laboratory services – Dynamic Purchasing System for Sequencing Services for Human-Derived Biological Samples

The contracting authority establishes a Dynamic Purchasing System for sequencing services for human-derived biological samples. All suppliers meeting the suitability requirements will be admitted to the system. Individual procurements will be conducted through mini-competitions within the DPS. The procedure is fully electronic. This Dynamic Purchasing System covers sequencing and associated laboratory and bioinformatics services for human-derived biological samples. The DPS is platform-agnostic and includes services performed using commercially available sequencing, enrichment, and single-cell analysis technologies, such as but not limited to: Sequencing modalities Whole Genome Sequencing (WGS), Whole Exome Sequencing (WES) Targeted DNA and RNA sequencing (custom and standardized panels) RNA-seq (bulk), single-cell and single-nucleus RNA-seq ATAC-seq (bulk), single-cell and single-nucleus ATAC-seq ChIP-seq and chromatin-state profiling Hi-C and related genome conformation assays Sequencing platforms (non-exhaustive, non-binding examples) -Short-read sequencing platforms, including optical- and chemistry-based systems -Long-read sequencing platforms, including single-molecule real-time and nanopore-based systems -Capillary electrophoresis Sanger sequencing systems (e.g., platforms commonly represented by ABI 3730/3500 series or equivalent) -Two-color and novel chemistry short-read platforms (e.g., platforms comparable to AVITI or equivalent) Single-cell and enrichment systems (non-binding examples) -Microfluidics- and droplet-based single-cell workflows (e.g., platforms comparable to 10x Genomics Chromium or equivalent) -Hybrid capture and target enrichment kits/workflows (e.g., systems comparable to Twist Bioscience target capture or equivalent) The DPS also covers: -Sample reception, QC, and nucleic acid preparation -Library preparation and enrichment -Sequencing execution -Primary, secondary, and optional tertiary bioinformatics analysis -Secure data delivery and...